To install the ProteoWizard tools, download the binary package for your platform, and unzip it into the directory of your choice.
For convenience, adjust your "PATH" environment variable to include your ProteoWizard tools directory, so that the command line tools may be run from any directory.
ProteoWizard supports the reading/writing of the following open formats on all platforms:
Data formats supported in 2.1.0 (note: vendor formats require Windows with vendor libraries):
ProteoWizard depends on vendor-supplied software libraries to access data in proprietary formats.
You can check to see whether the required components are installed:
Accessing certain vendor-format data files requires an associated library, which has its own licensing terms. as indicated in the table below.
|Vendor||Formats||Vendor Required Software||License|
|Agilent||MassHunter .d||distributed with ProteoWizard||MHDAC|
|Bruker||Compass .d, YEP, BAF, FID||distributed with ProteoWizard|
|Thermo Fisher||RAW||distributed with ProteoWizard||MSFileReader|
|Waters||MassLynx .raw||distributed with ProteoWizard||WRDAC|
|Applied Biosystems||WIFF||distributed with ProteoWizard||Wiff Reader Library|