ProteoWizard
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#include <MinimumPepXML.hpp>
Public Member Functions | |
SampleEnzyme () | |
void | write (XMLWriter &writer) const |
void | read (std::istream &is) |
bool | operator== (const SampleEnzyme &that) const |
bool | operator!= (const SampleEnzyme &that) const |
Public Attributes | |
std::string | name |
Controlled code name for the enzyme that can be referred to by applications. | |
std::string | description |
Free text to describe alternative names, special conditions, etc. | |
std::string | fidelity |
Semispecific means that at least one end of a pepide must conform to the cleavage specificity, (unless the peptide was at the terminus of the parent sequence). | |
boost::tribool | independent |
If there are multiple specificities and independent is true, then a single peptide cannot exhibit one specificity at one terminus and a different specificity at the other. | |
Specificity | specificity |
Definition at line 76 of file MinimumPepXML.hpp.
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inline |
Definition at line 78 of file MinimumPepXML.hpp.
void pwiz::data::pepxml::SampleEnzyme::write | ( | XMLWriter & | writer | ) | const |
Referenced by testSampleEnzyme().
void pwiz::data::pepxml::SampleEnzyme::read | ( | std::istream & | is | ) |
Referenced by testSampleEnzyme().
bool pwiz::data::pepxml::SampleEnzyme::operator== | ( | const SampleEnzyme & | that | ) | const |
bool pwiz::data::pepxml::SampleEnzyme::operator!= | ( | const SampleEnzyme & | that | ) | const |
std::string pwiz::data::pepxml::SampleEnzyme::name |
Controlled code name for the enzyme that can be referred to by applications.
Definition at line 82 of file MinimumPepXML.hpp.
Referenced by makeSampleEnzyme().
std::string pwiz::data::pepxml::SampleEnzyme::description |
Free text to describe alternative names, special conditions, etc.
Definition at line 86 of file MinimumPepXML.hpp.
Referenced by makeSampleEnzyme().
std::string pwiz::data::pepxml::SampleEnzyme::fidelity |
Semispecific means that at least one end of a pepide must conform to the cleavage specificity, (unless the peptide was at the terminus of the parent sequence).
Nonspecific means that neither end of a peptide must conform to the cleavage specificity.
Definition at line 93 of file MinimumPepXML.hpp.
Referenced by makeSampleEnzyme().
boost::tribool pwiz::data::pepxml::SampleEnzyme::independent |
If there are multiple specificities and independent is true, then a single peptide cannot exhibit one specificity at one terminus and a different specificity at the other.
If independent is false, then a single peptide can exhibit mixed specificities.
Definition at line 100 of file MinimumPepXML.hpp.
Referenced by makeSampleEnzyme().
Specificity pwiz::data::pepxml::SampleEnzyme::specificity |
Definition at line 102 of file MinimumPepXML.hpp.
Referenced by makeSampleEnzyme().