ProteoWizard
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#include <MinimumPepXML.hpp>
Public Member Functions | |
MSMSPipelineAnalysis () | |
void | write (XMLWriter &writer) const |
void | read (std::istream &is) |
bool | operator== (const MSMSPipelineAnalysis &that) const |
bool | operator!= (const MSMSPipelineAnalysis &that) const |
Public Attributes | |
std::string | date |
std::string | summaryXML |
std::string | xmlns |
std::string | xmlnsXSI |
std::string | XSISchemaLocation |
std::string | baseName |
full path file name of mzXML (minus the .mzXML) | |
std::string | raw_data_type |
raw data type extension (e.g. .mzXML) | |
std::string | raw_data |
raw data type extension (e.g. .mzXML) | |
std::string | msManufacturer |
Manufacturer of MS/MS instrument. | |
std::string | msModel |
Instrument model (cf mzXML) | |
std::string | msIonization |
Instrument model (cf mzXML) | |
std::string | msMassAnalyzer |
Ion trap, etc (cf mzXML) | |
std::string | msDetector |
EMT, etc(cf mzXML) | |
AnalysisSummaryPtr | analysisSummary |
DatasetDerivationPtr | datasetDerivation |
MSMSRunSummary | msmsRunSummary |
Definition at line 598 of file MinimumPepXML.hpp.
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inline |
Definition at line 600 of file MinimumPepXML.hpp.
void pwiz::data::pepxml::MSMSPipelineAnalysis::write | ( | XMLWriter & | writer | ) | const |
Referenced by testInvarianceUnderProteinProphet(), and testMSMSPipelineAnalysis().
void pwiz::data::pepxml::MSMSPipelineAnalysis::read | ( | std::istream & | is | ) |
Referenced by test(), testInvarianceUnderProteinProphet(), and testMSMSPipelineAnalysis().
bool pwiz::data::pepxml::MSMSPipelineAnalysis::operator== | ( | const MSMSPipelineAnalysis & | that | ) | const |
bool pwiz::data::pepxml::MSMSPipelineAnalysis::operator!= | ( | const MSMSPipelineAnalysis & | that | ) | const |
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::date |
Definition at line 602 of file MinimumPepXML.hpp.
Referenced by testMSMSPipelineAnalysis().
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::summaryXML |
Definition at line 603 of file MinimumPepXML.hpp.
Referenced by testMSMSPipelineAnalysis().
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::xmlns |
Definition at line 604 of file MinimumPepXML.hpp.
Referenced by testMSMSPipelineAnalysis().
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::xmlnsXSI |
Definition at line 605 of file MinimumPepXML.hpp.
Referenced by testMSMSPipelineAnalysis().
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::XSISchemaLocation |
Definition at line 606 of file MinimumPepXML.hpp.
Referenced by testMSMSPipelineAnalysis().
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::baseName |
full path file name of mzXML (minus the .mzXML)
Definition at line 609 of file MinimumPepXML.hpp.
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::raw_data_type |
raw data type extension (e.g. .mzXML)
Definition at line 612 of file MinimumPepXML.hpp.
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::raw_data |
raw data type extension (e.g. .mzXML)
Definition at line 615 of file MinimumPepXML.hpp.
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msManufacturer |
Manufacturer of MS/MS instrument.
Definition at line 618 of file MinimumPepXML.hpp.
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msModel |
Instrument model (cf mzXML)
Definition at line 621 of file MinimumPepXML.hpp.
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msIonization |
Instrument model (cf mzXML)
Definition at line 624 of file MinimumPepXML.hpp.
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msMassAnalyzer |
Ion trap, etc (cf mzXML)
Definition at line 627 of file MinimumPepXML.hpp.
std::string pwiz::data::pepxml::MSMSPipelineAnalysis::msDetector |
EMT, etc(cf mzXML)
Definition at line 630 of file MinimumPepXML.hpp.
AnalysisSummaryPtr pwiz::data::pepxml::MSMSPipelineAnalysis::analysisSummary |
Definition at line 632 of file MinimumPepXML.hpp.
DatasetDerivationPtr pwiz::data::pepxml::MSMSPipelineAnalysis::datasetDerivation |
Definition at line 633 of file MinimumPepXML.hpp.
MSMSRunSummary pwiz::data::pepxml::MSMSPipelineAnalysis::msmsRunSummary |
Definition at line 634 of file MinimumPepXML.hpp.
Referenced by testMerge(), and testMSMSPipelineAnalysis().