SelectedIndexPredicate Struct Reference

Inheritance diagram for SelectedIndexPredicate:

List of all members.

Public Member Functions
	SelectedIndexPredicate ()
virtual tribool	accept (const Protein &protein) const
	return true iff Protein is accepted
virtual bool	done () const
	return true iff done accepting proteins; this allows early termination of the iteration through the original ProteinList, possibly using assumptions about the order of the iteration (e.g.
	SelectedIndexPredicate ()
virtual tribool	accept (const SpectrumIdentity &spectrumIdentity) const
	return values: true: accept the Spectrum false: reject the Spectrum indeterminate: need to see the full Spectrum object to decide
virtual bool	done () const
	return true iff done accepting proteins; this allows early termination of the iteration through the original ProteinList, possibly using assumptions about the order of the iteration (e.g.
Public Member Functions inherited from pwiz::analysis::SpectrumList_Filter::Predicate
virtual msdata::DetailLevel	suggestedDetailLevel () const
	can be overridden in subclasses that know they will need a certain detail level; it must be overridden to return DetailLevel_FullData if binary data is needed
virtual boost::logic::tribool	accept (const msdata::Spectrum &spectrum) const
	return true iff Spectrum is accepted
virtual	~Predicate ()
Public Member Functions inherited from pwiz::analysis::ProteinList_Filter::Predicate
virtual	~Predicate ()

Public Attributes
bool	pastMaxIndex

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Detailed Description

Definition at line 76 of file ProteinList_FilterTest.cpp.

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Constructor & Destructor Documentation

SelectedIndexPredicate::SelectedIndexPredicate ( )

inline

Definition at line 80 of file ProteinList_FilterTest.cpp.

: pastMaxIndex(false) {}

SelectedIndexPredicate::SelectedIndexPredicate ( )

inline

Definition at line 217 of file SpectrumList_FilterTest.cpp.

: pastMaxIndex(false) {}

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Member Function Documentation

virtual tribool SelectedIndexPredicate::accept ( const Protein &  protein ) const

inlinevirtual

return true iff Protein is accepted

Reimplemented from pwiz::analysis::ProteinList_Filter::Predicate.

Definition at line 82 of file ProteinList_FilterTest.cpp.

References pwiz::proteome::Protein::index.

    {
        if (protein.index>5) pastMaxIndex = true;

        return (protein.index==1 ||
                protein.index==3 ||
                protein.index==5);
    }

virtual bool SelectedIndexPredicate::done ( ) const

inlinevirtual

return true iff done accepting proteins; this allows early termination of the iteration through the original ProteinList, possibly using assumptions about the order of the iteration (e.g.

index is increasing)

Reimplemented from pwiz::analysis::ProteinList_Filter::Predicate.

Definition at line 91 of file ProteinList_FilterTest.cpp.

    {
        return pastMaxIndex;
    }

virtual tribool SelectedIndexPredicate::accept ( const SpectrumIdentity &  spectrumIdentity ) const

inlinevirtual

return values: true: accept the Spectrum false: reject the Spectrum indeterminate: need to see the full Spectrum object to decide

Implements pwiz::analysis::SpectrumList_Filter::Predicate.

Definition at line 219 of file SpectrumList_FilterTest.cpp.

References pwiz::msdata::SpectrumIdentity::index.

    {
        if (spectrumIdentity.index>5) pastMaxIndex = true;

        return (spectrumIdentity.index==1 ||
                spectrumIdentity.index==3 ||
                spectrumIdentity.index==5);
    }

virtual bool SelectedIndexPredicate::done ( ) const

inlinevirtual

return true iff done accepting proteins; this allows early termination of the iteration through the original ProteinList, possibly using assumptions about the order of the iteration (e.g.

index is increasing)

Reimplemented from pwiz::analysis::ProteinList_Filter::Predicate.

Definition at line 228 of file SpectrumList_FilterTest.cpp.

    {
        return pastMaxIndex;
    }

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Member Data Documentation

bool SelectedIndexPredicate::pastMaxIndex

mutable

Definition at line 78 of file ProteinList_FilterTest.cpp.

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The documentation for this struct was generated from the following files:

• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/analysis/proteome_processing/ProteinList_FilterTest.cpp
• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/analysis/spectrum_processing/SpectrumList_FilterTest.cpp