Functions
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const CV &cv)
PWIZ_API_DECL void	read (std::istream &is, CV &cv)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const UserParam &userParam)
PWIZ_API_DECL void	read (std::istream &is, UserParam &userParam)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const CVParam &cv)
PWIZ_API_DECL void	read (std::istream &is, CVParam &cv)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ParamGroup &paramGroup)
PWIZ_API_DECL void	read (std::istream &is, ParamGroup &paramGroup)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const FileContent &fc)
PWIZ_API_DECL void	read (std::istream &is, FileContent &fc)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SourceFile &sf)
PWIZ_API_DECL void	read (std::istream &is, SourceFile &sf)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Contact &c)
PWIZ_API_DECL void	read (std::istream &is, Contact &c)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const FileDescription &fd)
PWIZ_API_DECL void	read (std::istream &is, FileDescription &fd)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Sample &sf)
PWIZ_API_DECL void	read (std::istream &is, Sample &sf)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Component &component)
PWIZ_API_DECL void	read (std::istream &is, Component &component)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ComponentList &componentList)
PWIZ_API_DECL void	read (std::istream &is, ComponentList &componentList)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Software &software)
PWIZ_API_DECL void	read (std::istream &is, Software &software)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const InstrumentConfiguration &instrumentConfiguration)
PWIZ_API_DECL void	read (std::istream &is, InstrumentConfiguration &instrumentConfiguration)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ProcessingMethod &processingMethod)
PWIZ_API_DECL void	read (std::istream &is, ProcessingMethod &processingMethod)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const DataProcessing &dataProcessing)
PWIZ_API_DECL void	read (std::istream &is, DataProcessing &dataProcessing)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Target &t)
PWIZ_API_DECL void	read (std::istream &is, Target &t)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ScanSettings &scanSettings)
PWIZ_API_DECL void	read (std::istream &is, ScanSettings &scanSettings)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const IsolationWindow &isolationWindow)
PWIZ_API_DECL void	read (std::istream &is, IsolationWindow &isolationWindow)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SelectedIon &selectedIon)
PWIZ_API_DECL void	read (std::istream &is, SelectedIon &selectedIon)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Activation &activation)
PWIZ_API_DECL void	read (std::istream &is, Activation &activation)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Precursor &precursor)
PWIZ_API_DECL void	read (std::istream &is, Precursor &precursor, const std::map< std::string, std::string > *legacyIdRefToNativeId=0)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Product &product)
PWIZ_API_DECL void	read (std::istream &is, Product &product)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ScanWindow &selectionWindow)
PWIZ_API_DECL void	read (std::istream &is, ScanWindow &selectionWindow)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Scan &scan, const MSData &msd)
PWIZ_API_DECL void	read (std::istream &is, Scan &scan)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ScanList &scanList, const MSData &msd)
PWIZ_API_DECL void	read (std::istream &is, ScanList &scanList)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const BinaryDataArray &binaryDataArray, const BinaryDataEncoder::Config &config=BinaryDataEncoder::Config())
PWIZ_API_DECL void	read (std::istream &is, BinaryDataArray &binaryDataArray, const MSData *msd=0)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Spectrum &spectrum, const MSData &msd, const BinaryDataEncoder::Config &config=BinaryDataEncoder::Config())
PWIZ_API_DECL void	read (std::istream &is, Spectrum &spectrum, BinaryDataFlag binaryDataFlag=IgnoreBinaryData, int version=0, const std::map< std::string, std::string > legacyIdRefToNativeId=0, const MSData msd=0, const SpectrumIdentityFromXML *id=0)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Chromatogram &chromatogram, const BinaryDataEncoder::Config &config=BinaryDataEncoder::Config())
PWIZ_API_DECL void	read (std::istream &is, Chromatogram &chromatogram, BinaryDataFlag binaryDataFlag=IgnoreBinaryData)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const SpectrumList &spectrumList, const MSData &msd, const BinaryDataEncoder::Config &config=BinaryDataEncoder::Config(), std::vector< boost::iostreams::stream_offset > spectrumPositions=0, const pwiz::util::IterationListenerRegistry iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, SpectrumListSimple &spectrumListSimple)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const ChromatogramList &chromatogramList, const BinaryDataEncoder::Config &config=BinaryDataEncoder::Config(), std::vector< boost::iostreams::stream_offset > chromatogramPositions=0, const pwiz::util::IterationListenerRegistry iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, ChromatogramListSimple &chromatogramListSimple)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const Run &run, const MSData &msd, const BinaryDataEncoder::Config &config=BinaryDataEncoder::Config(), std::vector< boost::iostreams::stream_offset > spectrumPositions=0, std::vector< boost::iostreams::stream_offset > chromatogramPositions=0, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, Run &run, SpectrumListFlag spectrumListFlag=IgnoreSpectrumList)
PWIZ_API_DECL void	write (minimxml::XMLWriter &writer, const MSData &msd, const BinaryDataEncoder::Config &config=BinaryDataEncoder::Config(), std::vector< boost::iostreams::stream_offset > spectrumPositions=0, std::vector< boost::iostreams::stream_offset > chromatogramPositions=0, const pwiz::util::IterationListenerRegistry *iterationListenerRegistry=0)
PWIZ_API_DECL void	read (std::istream &is, MSData &msd, SpectrumListFlag spectrumListFlag=IgnoreSpectrumList)

Function Documentation

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const CV &	cv
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		CV &	cv
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const UserParam &	userParam
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		UserParam &	userParam
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const CVParam &	cv
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		CVParam &	cv
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ParamGroup &	paramGroup
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		ParamGroup &	paramGroup
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const FileContent &	fc
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		FileContent &	fc
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SourceFile &	sf
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		SourceFile &	sf
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Contact &	c
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Contact &	c
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const FileDescription &	fd
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		FileDescription &	fd
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Sample &	sf
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Sample &	sf
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Component &	component
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Component &	component
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ComponentList &	componentList
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		ComponentList &	componentList
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Software &	software
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Software &	software
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const InstrumentConfiguration &	instrumentConfiguration
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		InstrumentConfiguration &	instrumentConfiguration
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ProcessingMethod &	processingMethod
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		ProcessingMethod &	processingMethod
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const DataProcessing &	dataProcessing
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		DataProcessing &	dataProcessing
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Target &	t
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Target &	t
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ScanSettings &	scanSettings
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		ScanSettings &	scanSettings
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const IsolationWindow &	isolationWindow
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		IsolationWindow &	isolationWindow
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SelectedIon &	selectedIon
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		SelectedIon &	selectedIon
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Activation &	activation
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Activation &	activation
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Precursor &	precursor
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Precursor &	precursor,
		const std::map< std::string, std::string > *	legacyIdRefToNativeId = `0`
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Product &	product
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Product &	product
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ScanWindow &	selectionWindow
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		ScanWindow &	selectionWindow
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Scan &	scan,
		const MSData &	msd
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Scan &	scan
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ScanList &	scanList,
		const MSData &	msd
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		ScanList &	scanList
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const BinaryDataArray &	binaryDataArray,
		const BinaryDataEncoder::Config &	config = `BinaryDataEncoder::Config()`
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		BinaryDataArray &	binaryDataArray,
		const MSData *	msd = `0`
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Spectrum &	spectrum,
		const MSData &	msd,
		const BinaryDataEncoder::Config &	config = `BinaryDataEncoder::Config()`
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Spectrum &	spectrum,
		BinaryDataFlag	binaryDataFlag = `IgnoreBinaryData`,
		int	version = `0`,
		const std::map< std::string, std::string > *	legacyIdRefToNativeId = `0`,
		const MSData *	msd = `0`,
		const SpectrumIdentityFromXML *	id = `0`
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Chromatogram &	chromatogram,
		const BinaryDataEncoder::Config &	config = `BinaryDataEncoder::Config()`
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Chromatogram &	chromatogram,
		BinaryDataFlag	binaryDataFlag = `IgnoreBinaryData`
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const SpectrumList &	spectrumList,
		const MSData &	msd,
		const BinaryDataEncoder::Config &	config = `BinaryDataEncoder::Config()`,
		std::vector< boost::iostreams::stream_offset > *	spectrumPositions = `0`,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = `0`
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		SpectrumListSimple &	spectrumListSimple
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const ChromatogramList &	chromatogramList,
		const BinaryDataEncoder::Config &	config = `BinaryDataEncoder::Config()`,
		std::vector< boost::iostreams::stream_offset > *	chromatogramPositions = `0`,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = `0`
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		ChromatogramListSimple &	chromatogramListSimple
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const Run &	run,
		const MSData &	msd,
		const BinaryDataEncoder::Config &	config = `BinaryDataEncoder::Config()`,
		std::vector< boost::iostreams::stream_offset > *	spectrumPositions = `0`,
		std::vector< boost::iostreams::stream_offset > *	chromatogramPositions = `0`,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = `0`
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		Run &	run,
		SpectrumListFlag	spectrumListFlag = `IgnoreSpectrumList`
	)

PWIZ_API_DECL void pwiz::msdata::IO::write	(	minimxml::XMLWriter &	writer,
		const MSData &	msd,
		const BinaryDataEncoder::Config &	config = `BinaryDataEncoder::Config()`,
		std::vector< boost::iostreams::stream_offset > *	spectrumPositions = `0`,
		std::vector< boost::iostreams::stream_offset > *	chromatogramPositions = `0`,
		const pwiz::util::IterationListenerRegistry *	iterationListenerRegistry = `0`
	)

PWIZ_API_DECL void pwiz::msdata::IO::read	(	std::istream &	is,
		MSData &	msd,
		SpectrumListFlag	spectrumListFlag = `IgnoreSpectrumList`
	)

Functions

Function Documentation