pwiz::frequency::PeakDetectorMatchedFilter Class Reference

MatchedFilter implementation of the PeakDetector interface. More...

#include <PeakDetectorMatchedFilter.hpp>

Inheritance diagram for pwiz::frequency::PeakDetectorMatchedFilter:

List of all members.

Classes
struct	Config
	structure for holding configuration More...
struct	Score
	structure for holding the matched filter calculation results More...

Public Member Functions
PeakDetector interface
virtual void	findPeaks (const pwiz::data::FrequencyData &fd, pwiz::data::peakdata::Scan &result) const =0
	Find the peaks in the frequency data, filling in Scan structure.
PeakDetectorMatchedFilter interface
virtual const Config &	config () const =0
	access to the configuration
virtual void	findPeaks (const pwiz::data::FrequencyData &fd, pwiz::data::peakdata::Scan &result, std::vector< Score > &scores) const =0
	same as PeakDetector::findPeaks(), but provides additional Score information
Public Member Functions inherited from pwiz::frequency::PeakDetector
virtual	~PeakDetector ()

Instantiation
static std::auto_ptr < PeakDetectorMatchedFilter >	create (const Config &config)
	create an instance.
virtual	~PeakDetectorMatchedFilter ()

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Detailed Description

MatchedFilter implementation of the PeakDetector interface.

Definition at line 41 of file PeakDetectorMatchedFilter.hpp.

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Constructor & Destructor Documentation

virtual pwiz::frequency::PeakDetectorMatchedFilter::~PeakDetectorMatchedFilter ( )

inlinevirtual

Definition at line 111 of file PeakDetectorMatchedFilter.hpp.

{}

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Member Function Documentation

static std::auto_ptr<PeakDetectorMatchedFilter> pwiz::frequency::PeakDetectorMatchedFilter::create ( const Config &  config )

static

create an instance.

virtual void pwiz::frequency::PeakDetectorMatchedFilter::findPeaks ( const pwiz::data::FrequencyData &  fd, pwiz::data::peakdata::Scan &  result  ) const

pure virtual

Find the peaks in the frequency data, filling in Scan structure.

Implements pwiz::frequency::PeakDetector.

Referenced by testFind().

virtual const Config& pwiz::frequency::PeakDetectorMatchedFilter::config ( ) const

pure virtual

access to the configuration

Referenced by testCreation().

virtual void pwiz::frequency::PeakDetectorMatchedFilter::findPeaks ( const pwiz::data::FrequencyData &  fd, pwiz::data::peakdata::Scan &  result, std::vector< Score > &  scores  ) const

pure virtual

same as PeakDetector::findPeaks(), but provides additional Score information

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The documentation for this class was generated from the following file:

• /Users/parag/_Research/pwiz/svn/trunk/pwiz/pwiz/analysis/frequency/PeakDetectorMatchedFilter.hpp