Public Member Functions | Private Member Functions | Private Attributes
pwiz::analysis::SpectrumList_MZWindow Class Reference

SpectrumList filter, for creating Spectrum sub-lists. More...

#include <SpectrumList_MZWindow.hpp>

Inheritance diagram for pwiz::analysis::SpectrumList_MZWindow:
pwiz::msdata::SpectrumListWrapper pwiz::msdata::SpectrumList

List of all members.

Public Member Functions

 SpectrumList_MZWindow (const msdata::SpectrumListPtr original, double mzLow, double mzHigh)
SpectrumList interface
virtual msdata::SpectrumPtr spectrum (size_t index, bool getBinaryData=false) const
 retrieve a spectrum by index
- Public Member Functions inherited from pwiz::msdata::SpectrumListWrapper
 SpectrumListWrapper (const SpectrumListPtr &inner)
virtual size_t size () const
 returns the number of spectra
virtual bool empty () const
 returns true iff (size() == 0) and (dataProcessingPtr.get() == NULL)
virtual const SpectrumIdentityspectrumIdentity (size_t index) const
 access to a spectrum index
virtual SpectrumPtr spectrum (size_t index, DetailLevel detailLevel) const
 retrieve a spectrum by index
virtual const
boost::shared_ptr< const
dataProcessingPtr () const
 returns the data processing affecting spectra retrieved through this interface
- Public Member Functions inherited from pwiz::msdata::SpectrumList
virtual size_t find (const std::string &id) const
 find id in the spectrum index (returns size() on failure)
virtual IndexList findNameValue (const std::string &name, const std::string &value) const
 find all spectrum indexes with specified name/value pair
virtual IndexList findSpotID (const std::string &spotID) const
 find all spectrum indexes with spotID (returns empty vector on failure)
virtual SpectrumPtr spectrum (const SpectrumPtr &seed, bool getBinaryData) const
 get a copy of the seed spectrum, optionally with its binary data populated this is useful for formats like mzML that can delay loading of binary data
virtual ~SpectrumList ()

Private Member Functions

 SpectrumList_MZWindow (SpectrumList_MZWindow &)
SpectrumList_MZWindowoperator= (SpectrumList_MZWindow &)

Private Attributes

double mzLow_
double mzHigh_

Additional Inherited Members

- Protected Attributes inherited from pwiz::msdata::SpectrumListWrapper
SpectrumListPtr inner_
DataProcessingPtr dp_

Detailed Description

SpectrumList filter, for creating Spectrum sub-lists.

Definition at line 37 of file SpectrumList_MZWindow.hpp.

Constructor & Destructor Documentation

pwiz::analysis::SpectrumList_MZWindow::SpectrumList_MZWindow ( const msdata::SpectrumListPtr  original,
double  mzLow,
double  mzHigh 
pwiz::analysis::SpectrumList_MZWindow::SpectrumList_MZWindow ( SpectrumList_MZWindow )

Member Function Documentation

virtual msdata::SpectrumPtr pwiz::analysis::SpectrumList_MZWindow::spectrum ( size_t  index,
bool  getBinaryData = false 
) const

retrieve a spectrum by index

  • binary data arrays will be provided if (getBinaryData == true);
  • client may assume the underlying Spectrum* is valid

Implements pwiz::msdata::SpectrumListWrapper.

SpectrumList_MZWindow& pwiz::analysis::SpectrumList_MZWindow::operator= ( SpectrumList_MZWindow )

Member Data Documentation

double pwiz::analysis::SpectrumList_MZWindow::mzLow_

Definition at line 49 of file SpectrumList_MZWindow.hpp.

double pwiz::analysis::SpectrumList_MZWindow::mzHigh_

Definition at line 50 of file SpectrumList_MZWindow.hpp.

The documentation for this class was generated from the following file: