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Z
A
Datum
MassSpread
(
pwiz::calibration
)
ProteinDetectionHypothesis
(
pwiz::identdata
)
software_p
(
pwiz::identdata
)
DBSequence
(
pwiz::identdata
)
MassTable
(
pwiz::identdata
)
ProteinDetectionList
(
pwiz::identdata
)
SoftwareMZ5
(
pwiz::msdata::mz5
)
Activation
(
pwiz::msdata
)
dbsequence_p
(
pwiz::identdata
)
Match
(
pwiz::data::pepxml
)
ProteinDetectionProtocol
(
pwiz::identdata
)
SourceFile
(
pwiz::identdata
)
AdaptedErrorDerivative
(
pwiz::frequency::DerivativeTest
)
DefaultArrayLengthSorter
MatchData
(
pwiz::data::pepxml
)
ProteinList
(
pwiz::proteome
)
SourceFile
(
pwiz::msdata
)
AdaptedErrorFunction
(
pwiz::frequency::DerivativeTest
)
DefaultReaderList
(
pwiz::identdata
)
Matcher
(
pwiz::eharmony
)
ProteinList_DecoyGenerator
(
pwiz::analysis
)
SourceFileMZ5
(
pwiz::msdata::mz5
)
AlternativeProtein
(
pwiz::data::pepxml
)
DefaultReaderList
(
pwiz::tradata
)
Matrix
(
pwiz::eharmony
)
ProteinList_DecoyGeneratorPredicate_Reversed
(
pwiz::analysis
)
Specificity
(
pwiz::data::pepxml
)
AmbiguousResidue
(
pwiz::identdata
)
DefaultReaderList
(
pwiz::proteome
)
Measure
(
pwiz::identdata
)
ProteinList_DecoyGeneratorPredicate_Shuffled
(
pwiz::analysis
)
SpectraData
(
pwiz::identdata
)
AminoAcidModification
(
pwiz::data::pepxml
)
DefaultReaderList
(
pwiz::msdata
)
Calibrator::Measurement
(
pwiz::calibration
)
ProteinList_Filter
(
pwiz::analysis
)
Spectrum
(
pwiz::msdata
)
AMTContainer
(
pwiz::eharmony
)
DefaultTabHandler
(
pwiz::utility
)
MemoryIndex
(
pwiz::data
)
ProteinList_FilterPredicate_IdSet
(
pwiz::analysis
)
SpectrumBinaryData
(
pwiz::analysis
)
AMTDatabase
(
pwiz::eharmony
)
DeletePtr
MemoryMRUCache
(
pwiz::msdata
)
ProteinList_FilterPredicate_IndexSet
(
pwiz::analysis
)
SpectrumDataFilter
(
pwiz::analysis
)
AnalysisCollection
(
pwiz::identdata
)
DelimReader
(
pwiz::identdata
)
MetadataReporter
(
pwiz::analysis
)
ProteinListCache
(
pwiz::proteome
)
SpectrumIdentification
(
pwiz::identdata
)
AnalysisData
(
pwiz::identdata
)
DelimWriter
(
pwiz::identdata
)
MixtureModel
(
pwiz::data::pepxml
)
ProteinListFactory
(
pwiz::analysis
)
SpectrumIdentificationItem
(
pwiz::identdata
)
AnalysisProtocolCollection
(
pwiz::identdata
)
Diff
(
pwiz::data
)
ModAminoAcidMass
(
pwiz::data::pepxml
)
ProteinListSimple
(
pwiz::proteome
)
SpectrumIdentificationList
(
pwiz::identdata
)
AnalysisResult
(
pwiz::data::pepxml
)
DiffConfig
(
pwiz::identdata
)
Modification
(
pwiz::identdata
)
ProteinListWrapper
(
pwiz::proteome
)
SpectrumIdentificationProtocol
(
pwiz::identdata
)
AnalysisSampleCollection
(
pwiz::identdata
)
DiffConfig
(
pwiz::tradata
)
Modification
(
pwiz::tradata
)
ProteomeData
(
pwiz::proteome
)
SpectrumIdentificationResult
(
pwiz::identdata
)
AnalysisSoftware
(
pwiz::identdata
)
DiffConfig
(
pwiz::proteome
)
Modification
(
pwiz::proteome
)
ProteomeDataFile
(
pwiz::proteome
)
SpectrumIdentity
(
pwiz::msdata
)
AnalysisSummary
(
pwiz::data::pepxml
)
DiffConfig
(
pwiz::msdata
)
ModificationInfo
(
pwiz::data::pepxml
)
Provider
(
pwiz::identdata
)
SpectrumIdentityFromMzXML
(
pwiz::msdata
)
AnalysisTimestamp
(
pwiz::data::pepxml
)
DigestedPeptide
(
pwiz::proteome
)
ModificationList
(
pwiz::proteome
)
Pseudo2DGel
(
pwiz::analysis
)
SpectrumIdentityFromXML
(
pwiz::msdata
)
analyzer_strings
(
pwiz::analysis
)
DigestedPeptideLessThan
ModificationMap
(
pwiz::proteome
)
Publication
(
pwiz::tradata
)
SpectrumInfo
(
pwiz::msdata
)
analyzer_strings< MetadataReporter >
(
pwiz::analysis
)
Digestion
(
pwiz::proteome
)
ModificationStateEntry
(
pwiz::eharmony
)
pwiz_RAMPAdapter
SpectrumIterator
(
pwiz::msdata
)
analyzer_strings< Pseudo2DGel >
(
pwiz::analysis
)
DistanceAttribute
(
pwiz::eharmony
)
mru_list
(
pwiz::util
)
Q
SpectrumList
(
pwiz::msdata
)
analyzer_strings< RegionSIC >
(
pwiz::analysis
)
DistributionPoint
(
pwiz::data::pepxml
)
MS2Deisotoper
(
pwiz::analysis
)
SpectrumList_ABI
(
pwiz::msdata::detail
)
analyzer_strings< RegionSlice >
(
pwiz::analysis
)
E
MS2NoiseFilter
(
pwiz::analysis
)
Q3RatioResult
(
pwiz::data::pepxml
)
SpectrumList_ABI_T2D
(
pwiz::msdata::detail
)
analyzer_strings< RegionTIC >
(
pwiz::analysis
)
MSData
(
pwiz::msdata
)
R
SpectrumList_Agilent
(
pwiz::msdata::detail
)
analyzer_strings< RunSummary >
(
pwiz::analysis
)
EditDistance
(
pwiz::eharmony
)
MSDataAnalyzer
(
pwiz::analysis
)
SpectrumList_Bruker
(
pwiz::msdata::detail
)
analyzer_strings< SpectrumBinaryData >
(
pwiz::analysis
)
Element
(
pwiz::chemistry::detail
)
MSDataAnalyzerContainer
(
pwiz::analysis
)
RAMPAdapter
(
pwiz::msdata
)
SpectrumList_BTDX
(
pwiz::msdata
)
analyzer_strings< SpectrumTable >
(
pwiz::analysis
)
Index::Entry
(
pwiz::data
)
MSDataAnalyzerDriver
(
pwiz::analysis
)
RAMPFILE
SpectrumList_ChargeStateCalculator
(
pwiz::analysis
)
AnotherRootHandler
MassDatabase::Entry
(
pwiz::calibration
)
MSDataCache
(
pwiz::analysis
)
Random
(
pwiz::math
)
SpectrumList_Filter
(
pwiz::analysis
)
Handler::Attributes::attribute
(
pwiz::minimxml::SAXParser
)
EnzymaticSearchConstraint
(
pwiz::data::pepxml
)
MSDataFile
(
pwiz::msdata
)
random_access_compressed_ifstream
(
pwiz::util
)
SpectrumList_FilterPredicate_ActivationType
(
pwiz::analysis
)
XMLWriter::Attributes
(
pwiz::minimxml
)
Enzyme
(
pwiz::identdata
)
MSDataMerger
(
pwiz::msdata
)
RandomDistance
(
pwiz::eharmony
)
SpectrumList_FilterPredicate_AnalyzerType
(
pwiz::analysis
)
Handler::Attributes
(
pwiz::minimxml::SAXParser
)
EnzymePtr_missedCleavages
MSDataWithSettableVersion
RawMassDatum
SpectrumList_FilterPredicate_DefaultArrayLengthSet
(
pwiz::analysis
)
auto_vector::auto_lvalue
EnzymePtr_specificity
MSIAMTData
(
pwiz::eharmony
)
Reader
(
pwiz::msdata
)
SpectrumList_FilterPredicate_IndexSet
(
pwiz::analysis
)
auto_vector
Enzymes
(
pwiz::identdata
)
MSIHandler
(
pwiz::utility
)
Reader
(
pwiz::tradata
)
SpectrumList_FilterPredicate_MSLevelSet
(
pwiz::analysis
)
B
ErrorEstimator
(
pwiz::calibration
)
MSInspectRecordBuilder
(
pwiz::peptideid
)
Reader
(
pwiz::proteome
)
SpectrumList_FilterPredicate_Polarity
(
pwiz::analysis
)
ParametrizedFunction::ErrorFunction
(
pwiz::frequency
)
MSLevelSorter
Reader
(
pwiz::identdata
)
SpectrumList_FilterPredicate_PrecursorMzSet
(
pwiz::analysis
)
BadListener
ErrorPoint
(
pwiz::data::pepxml
)
MSMSPipelineAnalysis
(
pwiz::data::pepxml
)
Reader1
SpectrumList_FilterPredicate_ScanEventSet
(
pwiz::analysis
)
BaseDiffConfig
(
pwiz::data
)
EvenMS2Predicate
MSMSRunSummary
(
pwiz::data::pepxml
)
Reader2
SpectrumList_FilterPredicate_ScanNumberSet
(
pwiz::analysis
)
basic_charcounter
(
pwiz::minimxml
)
EvenPredicate
MSnHeader
(
pwiz::msdata
)
Reader_ABI
(
pwiz::msdata
)
SpectrumList_FilterPredicate_ScanTimeRange
(
pwiz::analysis
)
BibliographicReference
(
pwiz::identdata
)
EvenRequester
MyBase
Reader_ABI_T2D
(
pwiz::msdata
)
SpectrumList_MetadataFixer
(
pwiz::analysis
)
Bin
(
pwiz
)
Evidence
(
pwiz::tradata
)
MyPred
Reader_Agilent
(
pwiz::msdata
)
SpectrumList_MGF
(
pwiz::msdata
)
BinaryDataArray
(
pwiz::msdata
)
Exporter
(
pwiz::eharmony
)
MyWrapper
Reader_Bruker
(
pwiz::msdata
)
SpectrumList_MSn
(
pwiz::msdata
)
BinaryDataEncoder
(
pwiz::msdata
)
ExtendedReaderList
(
pwiz::msdata
)
MZIntensityPair
(
pwiz::msdata
)
Reader_BTDX
(
pwiz::msdata
)
SpectrumList_mz5
(
pwiz::msdata
)
BinaryDataMZ5
(
pwiz::msdata::mz5
)
ExtraZeroSamplesFilter
(
pwiz::analysis
)
mzrtEqual
Reader_FASTA
(
pwiz::proteome
)
SpectrumList_mzML
(
pwiz::msdata
)
BinaryIndexStream
(
pwiz::data
)
F
MZRTField
(
pwiz::analysis
)
Reader_MGF
(
pwiz::msdata
)
SpectrumList_MZWindow
(
pwiz::analysis
)
C
MZTolerance
(
pwiz::chemistry
)
Reader_MSn
(
pwiz::msdata
)
SpectrumList_mzXML
(
pwiz::msdata
)
Feature
(
pwiz::data::peakdata
)
N
Reader_mz5
(
pwiz::msdata
)
SpectrumList_PeakFilter
(
pwiz::analysis
)
CalibrationParameters
(
pwiz::data
)
Feature2PeptideMatcher
(
pwiz::eharmony
)
Reader_mzML
(
pwiz::msdata
)
SpectrumList_PeakPicker
(
pwiz::analysis
)
Calibrator
(
pwiz::calibration
)
Feature_dataFetcher
(
pwiz::eharmony
)
nativeID_less
(
pwiz::peptideid
)
Reader_mzXML
(
pwiz::msdata
)
SpectrumList_PrecursorRecalculator
(
pwiz::analysis
)
CalibratorLog
(
pwiz::calibration
)
FeatureDetector
(
pwiz::analysis
)
NeighborJoiner
(
pwiz::eharmony
)
Reader_Thermo
(
pwiz::msdata
)
SpectrumList_PrecursorRefine
(
pwiz::analysis
)
CalibratorTrial
(
pwiz::calibration
)
FeatureDetectorPeakel
(
pwiz::analysis
)
NestedHandler
Reader_Waters
(
pwiz::msdata
)
SpectrumList_Smoother
(
pwiz::analysis
)
CancelListener
FeatureDetectorSimple
(
pwiz::analysis
)
PeakFamilyDetectorFT::NoDataException
(
pwiz::analysis
)
Reader2::ReaderConfig
SpectrumList_Sorter
(
pwiz::analysis
)
CancelProgressCallback
FeatureFile
(
pwiz::data::peakdata
)
Noise
(
pwiz::analysis
)
Reader1::ReaderConfig
SpectrumList_SorterPredicate_ScanStartTime
(
pwiz::analysis
)
basic_charcounter::category
(
pwiz::minimxml
)
FeatureModeler
(
pwiz::analysis
)
NoiseCalculator
(
pwiz::analysis
)
ReaderFail
(
pwiz::identdata
)
SpectrumList_Thermo
(
pwiz::msdata::detail
)
CharIndexedVector
(
pwiz::util
)
FeatureModeler_Gaussian
(
pwiz::analysis
)
NoiseCalculator_2Pass
(
pwiz::analysis
)
ReaderFail
(
pwiz::tradata
)
SpectrumList_TitleMaker
(
pwiz::analysis
)
CharIndexedVectorConstIterator
(
pwiz::util
)
FeatureSequenced
(
pwiz::eharmony
)
NormalDistributionSearch
(
pwiz::eharmony
)
ReaderFail
(
pwiz::proteome
)
SpectrumList_Waters
(
pwiz::msdata::detail
)
CharIndexedVectorIterator
(
pwiz::util
)
Fifth
NumberOfMS2IDs
(
pwiz::eharmony
)
ReaderFail
(
pwiz::msdata
)
SpectrumList_ZeroSamplesFilter
(
pwiz::analysis
)
Chromatogram
(
pwiz::msdata
)
FifthHandler
O
ReaderList
(
pwiz::identdata
)
SpectrumListBase
(
pwiz::msdata
)
ChromatogramDataFilter
(
pwiz::analysis
)
FileContent
(
pwiz::msdata
)
ReaderList
(
pwiz::proteome
)
SpectrumListCache
(
pwiz::msdata
)
ChromatogramIdentity
(
pwiz::msdata
)
FileDescription
(
pwiz::msdata
)
OBO
(
pwiz::data
)
ReaderList
(
pwiz::msdata
)
SpectrumListFactory
(
pwiz::analysis
)
ChromatogramList
(
pwiz::msdata
)
FileInformationMZ5
(
pwiz::msdata::mz5
)
Observation
(
pwiz::eharmony
)
ReaderList
(
pwiz::tradata
)
SpectrumListSimple
(
pwiz::msdata
)
ChromatogramList_ABI
(
pwiz::msdata::detail
)
FileInformationMZ5Data
(
pwiz::msdata::mz5
)
once_flag_proxy
(
pwiz::util
)
PepxmlRecordReader::record
(
pwiz::analysis
)
SpectrumListWrapper
(
pwiz::msdata
)
ChromatogramList_Agilent
(
pwiz::msdata::detail
)
Filter
(
pwiz::identdata
)
OneMinusAbs
IPIFASTADatabase::Record
(
pwiz::proteome
)
SpectrumMZ5
(
pwiz::msdata::mz5
)
ChromatogramList_Bruker
(
pwiz::msdata::detail
)
FilterWrapper
OrderedPair
(
pwiz::math
)
Record
(
pwiz::chemistry::Element::Info
)
SpectrumQuery
(
pwiz::data::pepxml
)
ChromatogramList_mz5
(
pwiz::msdata
)
First
OrderedPairContainerRef
(
pwiz::math
)
Record
(
pwiz::proteome::AminoAcid::Info
)
RegionAnalyzer::SpectrumStats
(
pwiz::analysis
)
ChromatogramList_mzML
(
pwiz::msdata
)
FirstHandler
Organization
(
pwiz::identdata
)
PeptideID::Record
(
pwiz::peptideid
)
SpectrumTable
(
pwiz::analysis
)
ChromatogramList_SavitzkyGolaySmoother
(
pwiz::analysis
)
FlatRecordBuilder
(
pwiz::peptideid
)
organization_p
(
pwiz::identdata
)
MSIHandler::Record
(
pwiz::utility
)
SplineWarpFunction
(
pwiz::eharmony
)
ChromatogramList_Thermo
(
pwiz::msdata::detail
)
Formula
(
pwiz::chemistry
)
XMLWriter::OutputObserver
(
pwiz::minimxml
)
ReferenceRead_mz5
(
pwiz::msdata::mz5
)
CalibratorTrial::State
(
pwiz::calibration
)
ChromatogramList_Waters
(
pwiz::msdata::detail
)
FragmentArray
(
pwiz::identdata
)
P
ReferenceWrite_mz5
(
pwiz::msdata::mz5
)
Stats
(
pwiz::math
)
ChromatogramListBase
(
pwiz::msdata
)
Fragmentation
(
pwiz::proteome
)
RefListMZ5
(
pwiz::msdata::mz5
)
RegionAnalyzer::Stats
(
pwiz::analysis
)
ChromatogramListSimple
(
pwiz::msdata
)
FrequencyData
(
pwiz::data
)
MassSpread::Pair
(
pwiz::calibration
)
RefListMZ5Data
(
pwiz::msdata::mz5
)
Handler::Status
(
pwiz::minimxml::SAXParser
)
ChromatogramListWrapper
(
pwiz::analysis
)
FrequencyEstimator
(
pwiz::frequency
)
Parabola
(
pwiz::math
)
RefMZ5
(
pwiz::msdata::mz5
)
StringMatchCVMap
(
pwiz::identdata
)
ChromatogramMZ5
(
pwiz::msdata::mz5
)
FrequencyEstimatorPhysicalModel
(
pwiz::frequency
)
ParamContainer
(
pwiz::data
)
RefMZ5Data
(
pwiz::msdata::mz5
)
SubstitutionModification
(
pwiz::identdata
)
ClickwrapPrompter
(
pwiz::util
)
FrequencyEstimatorSimple
(
pwiz::frequency
)
Parameter
(
pwiz::data::pepxml
)
RegexCVMap
(
pwiz::identdata
)
T
Image::Color
(
pwiz::util
)
FTSieve
Software::Parameter
(
pwiz::data::peakdata
)
RegionAnalyzer
(
pwiz::analysis
)
COMInitializer
(
pwiz::util
)
G
ParameterEstimator
(
pwiz::frequency
)
RegionSIC
(
pwiz::analysis
)
TabHandler
(
pwiz::utility
)
Component
(
pwiz::msdata
)
ParametrizedCosine
RegionSlice
(
pwiz::analysis
)
TabReader
(
pwiz::utility
)
ComponentList
(
pwiz::msdata
)
IslandizedDatabase::Gaussian
(
pwiz::eharmony
)
ParametrizedDerivativeSlice
(
pwiz::frequency::DerivativeTest
)
RegionTIC
(
pwiz::analysis
)
TabularConfig
(
pwiz::analysis
)
ComponentListMZ5
(
pwiz::msdata::mz5
)
glob_t
ParametrizedFunction
(
pwiz::frequency
)
Residue
(
pwiz::identdata
)
Target
(
pwiz::tradata
)
ComponentMZ5
(
pwiz::msdata::mz5
)
Goober
ParametrizedFunctionSlice
(
pwiz::frequency::DerivativeTest
)
CalibratorTrial::Results
(
pwiz::calibration
)
Target
(
pwiz::msdata
)
ComponentsMZ5
(
pwiz::msdata::mz5
)
H
ParamGroup
(
pwiz::data
)
RetentionTime
(
pwiz::tradata
)
TargetList
(
pwiz::tradata
)
Compound
(
pwiz::tradata
)
ParamGroupMZ5
(
pwiz::msdata::mz5
)
RocDataPoint
(
pwiz::data::pepxml
)
Term
(
pwiz::data
)
PepxmlRecordReader::Config
(
pwiz::analysis
)
HammingDistance
(
pwiz::eharmony
)
ParamListMZ5
(
pwiz::msdata::mz5
)
Root
TestAminoAcid
MSDataCache::Config
(
pwiz::analysis
)
Handler
(
pwiz::minimxml::SAXParser
)
ParamListMZ5Data
(
pwiz::msdata::mz5
)
RootHandler
TestChargeStateCalculator
Serializer_Text::Config
(
pwiz::identdata
)
HandlerFeature
(
pwiz::data::peakdata
)
ParamListsMZ5
(
pwiz::msdata::mz5
)
RTDiffDistribution
(
pwiz::eharmony
)
TestData
Serializer_protXML::Config
(
pwiz::identdata
)
HandlerPeak
(
pwiz::data::peakdata
)
Path
(
pwiz::msaux
)
RTMatches_Any
(
pwiz::analysis
)
TestDatum
Serializer_pepXML::Config
(
pwiz::identdata
)
HandlerPeakel
(
pwiz::data::peakdata
)
Peak
(
pwiz::analysis
)
RTMatches_Contains
(
pwiz::analysis
)
TestDeisotoper
Serializer_mzIdentML::Config
(
pwiz::identdata
)
HasBinaryDataPredicate
Peak
(
pwiz::data::peakdata
)
RTMatches_IsContainedIn
(
pwiz::analysis
)
TestETDMassFilter
Reader2::Config
HasID
(
pwiz::data::diff_impl
)
PeakData
(
pwiz::data::peakdata
)
Run
(
pwiz::msdata
)
TestFormula
Reader1::Config
I
PeakDetector
(
pwiz::frequency
)
RunHeaderStruct
TestFragmentation
Reader::Config
(
pwiz::identdata
)
PeakDetector
(
pwiz::analysis
)
RunMZ5
(
pwiz::msdata::mz5
)
TestInfo
PeakDetectorMatchedFilter::Config
(
pwiz::frequency
)
id_p
(
pwiz::identdata
)
PeakDetectorMatchedFilter
(
pwiz::frequency
)
RunSummary
(
pwiz::analysis
)
TestIterationListener
FrequencyEstimatorPhysicalModel::Config
(
pwiz::frequency
)
IdentData
(
pwiz::identdata
)
PeakDetectorNaive
(
pwiz::frequency
)
S
TestIterationListener_WithCancel
XMLWriter::Config
(
pwiz::minimxml
)
IdentDataFile
(
pwiz::identdata
)
Peakel
(
pwiz::data::peakdata
)
TestListener
IsotopeEnvelopeEstimator::Config
(
pwiz::chemistry
)
Identifiable
(
pwiz::identdata
)
PeakelGrower
(
pwiz::analysis
)
Same
(
pwiz::data::diff_impl
)
TestMetadataFixer
Serializer_FASTA::Config
(
pwiz::proteome
)
IdentifiableParamContainer
(
pwiz::identdata
)
PeakelGrower_Proximity
(
pwiz::analysis
)
SameDeep
(
pwiz::data::diff_impl
)
TestModification
Reader_FASTA::Config
(
pwiz::proteome
)
Image
(
pwiz::util
)
PeakelPicker
(
pwiz::analysis
)
Sample
(
pwiz::identdata
)
TestModifiedPeptide
Digestion::Config
(
pwiz::proteome
)
Index
(
pwiz::data
)
PeakelPicker_Basic
(
pwiz::analysis
)
Sample
(
pwiz::msdata
)
TestMS2Denoise
PrecursorRecalculatorDefault::Config
(
pwiz::analysis
)
Index_mzML
(
pwiz::msdata
)
PeakExtractor
(
pwiz::analysis
)
SampleDatum
(
pwiz::data
)
TestOperator
PrecursorMassFilter::Config
(
pwiz::analysis
)
SpectrumList_mzXML::index_not_found
(
pwiz::msdata
)
PeakFamily
(
pwiz::data::peakdata
)
SampledData
(
pwiz::math::MatchedFilter
)
TestOutputObserver
MS2NoiseFilter::Config
(
pwiz::analysis
)
IndexList
(
pwiz::proteome
)
PeakFamilyDetector
(
pwiz::analysis
)
SampleEnzyme
(
pwiz::data::pepxml
)
TestPair
SpectrumIterator::Config
(
pwiz::msdata
)
IndexList
(
pwiz::msdata
)
PeakFamilyDetectorFT
(
pwiz::analysis
)
SampleMZ5
(
pwiz::msdata::mz5
)
TestPathmask
Serializer_mzXML::Config
(
pwiz::msdata
)
Inputs
(
pwiz::identdata
)
PeakFinder
(
pwiz::analysis
)
SavitzkyGolaySmoother
(
pwiz::analysis
)
TestPathPredicate
(
pwiz::util
)
MS2Deisotoper::Config
(
pwiz::analysis
)
Instrument
(
pwiz::tradata
)
PeakFinder_SNR
(
pwiz::analysis
)
saxstring
(
pwiz::minimxml::SAXParser
)
TestPeptide
Serializer_mzML::Config
(
pwiz::msdata
)
InstrumentConfiguration
(
pwiz::msdata
)
PeakFitter
(
pwiz::analysis
)
Scan
(
pwiz::msdata
)
TestReader
Reader::Config
(
pwiz::msdata
)
InstrumentConfigurationMZ5
(
pwiz::msdata::mz5
)
PeakFitter_Parabola
(
pwiz::analysis
)
Scan
(
pwiz::data::peakdata
)
TestSpectrumInfo
PeakFitter_Parabola::Config
(
pwiz::analysis
)
InstrumentStruct
Pep2MzIdent
(
pwiz::identdata
)
ScanCacheStruct
TestThresholder
PeakFinder_SNR::Config
(
pwiz::analysis
)
IntegerSet
(
pwiz::util
)
Peptide
(
pwiz::identdata
)
ScanHeaderStruct
TextWriter
(
pwiz::proteome
)
PeakFamilyDetectorFT::Config
(
pwiz::analysis
)
Interpretation
(
pwiz::tradata
)
Peptide
(
pwiz::tradata
)
ScanList
(
pwiz::msdata
)
TextWriter
(
pwiz::tradata
)
PeakelPicker_Basic::Config
(
pwiz::analysis
)
IntegerSet::Interval
(
pwiz::util
)
Peptide
(
pwiz::proteome
)
ScanListMZ5
(
pwiz::msdata::mz5
)
TextWriter
(
pwiz::msdata
)
PeakelGrower_Proximity::Config
(
pwiz::analysis
)
IonType
(
pwiz::identdata
)
PeptideDatabase
(
pwiz::proteome
)
ScanMZ5
(
pwiz::msdata::mz5
)
TextWriter
(
pwiz::identdata
)
NoiseCalculator_2Pass::Config
(
pwiz::analysis
)
IPIFASTADatabase
(
pwiz::proteome
)
PeptideDatabaseFormula
(
pwiz::proteome
)
ScanSettingMZ5
(
pwiz::msdata::mz5
)
ThreadStatus
FeatureDetectorPeakel::Config
(
pwiz::analysis
)
Is_T2D_Directory
PeptideDatabaseRecord
(
pwiz::proteome
)
ScanSettings
(
pwiz::msdata
)
ThresholdFilter
(
pwiz::analysis
)
SpectrumTable::Config
(
pwiz::analysis
)
IsDirectory
PeptideEntry
(
pwiz::eharmony
)
ScansMZ5
(
pwiz::msdata::mz5
)
TimeIntensityPair
(
pwiz::msdata
)
BinaryDataEncoder::Config
(
pwiz::msdata
)
IsFS
PeptideEvidence
(
pwiz::identdata
)
ScanWindow
(
pwiz::msdata
)
Timer
(
pwiz::util
)
SpectrumBinaryData::Config
(
pwiz::analysis
)
IsInt
PeptideHypothesis
(
pwiz::identdata
)
PeakDetectorMatchedFilter::Score
(
pwiz::frequency
)
TraData
(
pwiz::tradata
)
RunSummary::Config
(
pwiz::analysis
)
IslandizedDatabase::Island
(
pwiz::eharmony
)
PeptideID
(
pwiz::peptideid
)
SearchDatabase
(
pwiz::identdata
)
TraDataFile
(
pwiz::tradata
)
RegionTIC::Config
(
pwiz::analysis
)
IslandizedDatabase
(
pwiz::eharmony
)
PeptideID_dataFetcher
(
pwiz::eharmony
)
SearchDatabase
(
pwiz::data::pepxml
)
Transition
(
pwiz::tradata
)
RegionSlice::Config
(
pwiz::analysis
)
IsObject
(
pwiz
)
PeptideID_flat
(
pwiz::peptideid
)
SearchHit
(
pwiz::data::pepxml
)
TranslationTable
(
pwiz::identdata
)
RegionSIC::Config
(
pwiz::analysis
)
IsolationWindow
(
pwiz::msdata
)
PeptideID_pepXml
(
pwiz::peptideid
)
SearchModification
(
pwiz::identdata
)
Translator_mz5
(
pwiz::msdata::mz5
)
RegionAnalyzer::Config
(
pwiz::analysis
)
Isotope
(
pwiz::chemistry::detail
)
PeptideIDMap
(
pwiz::peptideid
)
SearchNeighborhoodCalculator
(
pwiz::eharmony
)
TruncatedLorentzian
(
pwiz::frequency
)
Pseudo2DGel::Config
(
pwiz::analysis
)
IsotopeCalculator
(
pwiz::chemistry
)
PeptideMatcher
(
pwiz::eharmony
)
SearchResult
(
pwiz::data::pepxml
)
TruncatedLorentzianEstimator
(
pwiz::frequency
)
Configuration
(
pwiz::tradata
)
IsotopeEnvelopeEstimator
(
pwiz::chemistry
)
PeptideProphetResult
(
pwiz::data::pepxml
)
SearchScore
(
pwiz::data::pepxml
)
TruncatedLorentzianParameters
(
pwiz::frequency
)
CalibratorTrial::Configuration
(
pwiz::calibration
)
IsotopeTable
(
pwiz::chemistry
)
PeptideProphetSummary
(
pwiz::data::pepxml
)
SearchSummary
(
pwiz::data::pepxml
)
U
Configuration_mz5
(
pwiz::msdata::mz5
)
IsRawData
PepxmlRecordReader
(
pwiz::analysis
)
Second
Connection_mz5
(
pwiz::msdata::mz5
)
IsRawFile
PepXMLSpecificity
(
pwiz::identdata
)
SecondHandler
IterationListener::UpdateMessage
(
pwiz::util
)
Digestion::const_iterator
(
pwiz::proteome
)
IsSQ
Person
(
pwiz::identdata
)
SecondIs
(
pwiz
)
usage_exception
(
pwiz::util
)
Contact
(
pwiz::identdata
)
IsWiffFile
person_p
(
pwiz::identdata
)
SelectedIndexPredicate
user_error
(
pwiz::util
)
Contact
(
pwiz::tradata
)
IterationListener
(
pwiz::util
)
PiecewiseLinearWarpFunction
(
pwiz::eharmony
)
SelectedIon
(
pwiz::msdata
)
UserParam
(
pwiz::data
)
Contact
(
pwiz::msdata
)
IterationListenerRegistry
(
pwiz::util
)
Image::Point
(
pwiz::util
)
seq_p
(
pwiz::identdata
)
UserParamMZ5
(
pwiz::msdata::mz5
)
ContactRole
(
pwiz::identdata
)
IntegerSet::Iterator
(
pwiz::util
)
PointsToSame
sequence_p
(
pwiz::identdata
)
UserParamMZ5Data
(
pwiz::msdata::mz5
)
ContVocabMZ5
(
pwiz::msdata::mz5
)
PeptideID::Iterator
(
pwiz::peptideid
)
Precursor
(
pwiz::tradata
)
SequenceCollection
(
pwiz::identdata
)
V
ContVocabMZ5Data
(
pwiz::msdata::mz5
)
PeptideID::IteratorInternal
(
pwiz::peptideid
)
Precursor
(
pwiz::msdata
)
Serializer_FASTA
(
pwiz::proteome
)
Correlation
(
pwiz::math::MatchedFilter
)
K
SpectrumList_PrecursorRefine::PrecursorInfo
(
pwiz::analysis
)
Serializer_MGF
(
pwiz::msdata
)
Validation
(
pwiz::tradata
)
CSHA1
PrecursorRecalculator::PrecursorInfo
(
pwiz::analysis
)
Serializer_MSn
(
pwiz::msdata
)
VectorFunction
(
pwiz::frequency::DerivativeTest
)
CustomPair
KernelTraits
(
pwiz::math::MatchedFilter
)
SpectrumInfo::PrecursorInfo
(
pwiz::msdata
)
Serializer_mz5
(
pwiz::msdata
)
VectorTabHandler
(
pwiz::utility
)
CV
(
pwiz::cv
)
KernelTraitsBase
(
pwiz::math::MatchedFilter
)
PrecursorListMZ5
(
pwiz::msdata::mz5
)
Serializer_mzIdentML
(
pwiz::identdata
)
Version
(
pwiz::analysis
)
CVIDMatchCVMap
(
pwiz::identdata
)
KernelTraitsBase< Y(*)(X)>
(
pwiz::math::MatchedFilter
)
PrecursorMassFilter
(
pwiz::analysis
)
Serializer_mzML
(
pwiz::msdata
)
Version
(
pwiz::identdata
)
CVMap
(
pwiz::identdata
)
KeyLessThan
(
pwiz::eharmony
)
PrecursorMZ5
(
pwiz::msdata::mz5
)
Serializer_mzXML
(
pwiz::msdata
)
Version
(
pwiz::proteome
)
CVParam
(
pwiz::data
)
L
PrecursorRecalculator
(
pwiz::analysis
)
Serializer_pepXML
(
pwiz::identdata
)
Version
(
pwiz::tradata
)
CVParamIs
(
pwiz::data
)
PrecursorRecalculatorDefault
(
pwiz::analysis
)
Serializer_protXML
(
pwiz::identdata
)
Version
(
pwiz::msdata
)
CVParamIsChildOf
(
pwiz::data
)
LeastSquaresCalibrator
(
pwiz::calibration
)
SpectrumList_Sorter::Predicate
(
pwiz::analysis
)
Serializer_Text
(
pwiz::identdata
)
Version
(
pwiz
)
CVParamMZ5
(
pwiz::msdata::mz5
)
LegacyAdapter_Instrument
(
pwiz::msdata
)
SpectrumList_Filter::Predicate
(
pwiz::analysis
)
Serializer_traML
(
pwiz::tradata
)
virtual_map
(
pwiz::util
)
CVParamMZ5Data
(
pwiz::msdata::mz5
)
LegacyAdapter_Software
(
pwiz::msdata
)
ProteinList_Filter::Predicate
(
pwiz::analysis
)
SetRetentionTime
W
CVRefMZ5
(
pwiz::msdata::mz5
)
LinearLeastSquares< LinearLeastSquaresType_LU >
(
pwiz::math
)
ProteinList_DecoyGenerator::Predicate
(
pwiz::analysis
)
SHA1_ostream
(
pwiz::util
)
CVRefMZ5Data
(
pwiz::msdata::mz5
)
LinearLeastSquares< LinearLeastSquaresType_QR >
(
pwiz::math
)
Prediction
(
pwiz::tradata
)
SHA1_WORKSPACE_BLOCK
WarpFunction
(
pwiz::eharmony
)
CVTermInfo
(
pwiz::cv
)
LinearSolver< LinearSolverType_LU >
(
pwiz::math
)
PrintAttribute
SHA1Calculator
(
pwiz::util
)
WeightedHammingDistance
(
pwiz::eharmony
)
CVTranslator
(
pwiz::data
)
LinearSolver< LinearSolverType_QR >
(
pwiz::math
)
PrintEventHandler
SHA1Filter
(
pwiz::util
)
WhittakerSmoother
(
pwiz::analysis
)
D
LinearWarpFunction
(
pwiz::eharmony
)
ProcessingMethod
(
pwiz::msdata
)
SHA1OutputObserver
(
pwiz::msdata
)
IdentDataFile::WriteConfig
(
pwiz::identdata
)
LocalMaximumPeakDetector
(
pwiz::analysis
)
ProcessingMethodListMZ5
(
pwiz::msdata::mz5
)
SHA1SymmetricFilter
(
pwiz::util
)
TraDataFile::WriteConfig
(
pwiz::tradata
)
DatabaseQuery
(
pwiz::eharmony
)
PeptideID::Location
(
pwiz::peptideid
)
ProcessingMethodMZ5
(
pwiz::msdata::mz5
)
shared_map
(
pwiz::util
)
ProteomeDataFile::WriteConfig
(
pwiz::proteome
)
DatabaseTranslation
(
pwiz::identdata
)
location_less
(
pwiz::peptideid
)
Product
(
pwiz::tradata
)
SpectrumIterator::Sieve
(
pwiz::msdata
)
MSDataFile::WriteConfig
(
pwiz::msdata
)
DataCollection
(
pwiz::identdata
)
LU
Product
(
pwiz::msdata
)
Simple
WriteCVParam
DataFetcherContainer
(
pwiz::eharmony
)
M
ProductSpace
(
pwiz::math::MatchedFilter
)
SimpleAnalyzer
X
DataFilter
(
pwiz::data::pepxml
)
MSDataAnalyzerDriver::ProgressCallback
(
pwiz::analysis
)
SimpleProgressCallback
MSDataAnalyzer::DataInfo
(
pwiz::analysis
)
MagnitudeLorentzian
(
pwiz::frequency
)
Protein
(
pwiz::tradata
)
Smoother
(
pwiz::analysis
)
XMLWriter
(
pwiz::minimxml
)
DataProcessing
(
pwiz::msdata
)
MascotReader
(
pwiz::identdata
)
Protein
(
pwiz::proteome
)
Software
(
pwiz::tradata
)
Z
DataProcessingMZ5
(
pwiz::msdata::mz5
)
MassAbundance
(
pwiz::chemistry
)
ProteinAmbiguityGroup
(
pwiz::identdata
)
Software
(
pwiz::msdata
)
DatasetDerivation
(
pwiz::data::pepxml
)
MassDatabase
(
pwiz::calibration
)
ProteinDetection
(
pwiz::identdata
)
Software
(
pwiz::data::peakdata
)
ZeroSampleFiller
(
pwiz::analysis
)
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