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MSDataFile.hpp File Reference
#include "pwiz/utility/misc/Export.hpp"
#include "MSData.hpp"
#include "Reader.hpp"
#include "BinaryDataEncoder.hpp"
#include "pwiz/utility/misc/IterationListener.hpp"

Go to the source code of this file.

Classes

struct  pwiz::msdata::MSDataFile
 MSData object plus file I/O. More...
struct  pwiz::msdata::MSDataFile::WriteConfig
 configuration for write() More...

Namespaces

namespace  pwiz
 AMTContainer.hpp.
namespace  pwiz::msdata

Functions

PWIZ_API_DECL void pwiz::msdata::calculateSourceFileSHA1 (SourceFile &sourceFile)
 calculates and adds a CV term for the SHA1 checksum of a source file element
PWIZ_API_DECL void pwiz::msdata::calculateSHA1Checksums (const MSData &msd)
 Iterate and calculate SHA-1 for all source files.
PWIZ_API_DECL std::ostream & pwiz::msdata::operator<< (std::ostream &os, MSDataFile::Format format)
PWIZ_API_DECL std::ostream & pwiz::msdata::operator<< (std::ostream &os, const MSDataFile::WriteConfig &config)

Variables

 Format_Text
 Format_mzML
 Format_mzXML
 Format_MGF
 Format_MS1
 Format_CMS1
 Format_MS2
 Format_CMS2

Variable Documentation

Format_Text

Definition at line 49 of file MSDataFile.hpp.

Format_mzML

Definition at line 49 of file MSDataFile.hpp.

Format_mzXML

Definition at line 49 of file MSDataFile.hpp.

Referenced by demo(), test(), and validateWriteRead().

Format_MGF

Definition at line 49 of file MSDataFile.hpp.

Format_MS1

Definition at line 49 of file MSDataFile.hpp.

Format_CMS1

Definition at line 49 of file MSDataFile.hpp.

Format_MS2

Definition at line 49 of file MSDataFile.hpp.

Format_CMS2

Definition at line 49 of file MSDataFile.hpp.