ProteoWizard
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#include "AMTDatabase.hpp"
#include "AMTContainer.hpp"
#include "pwiz/utility/proteome/Ion.hpp"
#include "pwiz/utility/misc/unit.hpp"
Go to the source code of this file.
Typedefs | |
typedef IslandizedDatabase::Gaussian | Gaussian |
Functions | |
boost::shared_ptr< SpectrumQuery > | makeSpectrumQuery (const double &mass, const int &charge, const double &rt, const string &sequence, const double &score=0.95) |
boost::shared_ptr< AMTContainer > | makeAMTContainer () |
void | write (const Gaussian &gaussian) |
void | test () |
int | main () |
typedef IslandizedDatabase::Gaussian Gaussian |
Definition at line 37 of file AMTDatabaseTest.cpp.
boost::shared_ptr<SpectrumQuery> makeSpectrumQuery | ( | const double & | mass, |
const int & | charge, | ||
const double & | rt, | ||
const string & | sequence, | ||
const double & | score = 0.95 |
||
) |
Definition at line 39 of file AMTDatabaseTest.cpp.
Referenced by makeAMTContainer(), makeMatch(), makeMSMSRunSummary(), test(), testAdjustRT(), testMerge(), testPeptideID_dataFetcherConstructor(), and testSpectrumQuery().
boost::shared_ptr<AMTContainer> makeAMTContainer | ( | ) |
Definition at line 52 of file AMTDatabaseTest.cpp.
References makeSpectrumQuery().
Referenced by test().
void write | ( | const Gaussian & | gaussian | ) |
Definition at line 79 of file AMTDatabaseTest.cpp.
References pwiz::eharmony::IslandizedDatabase::Gaussian::mu, and pwiz::eharmony::IslandizedDatabase::Gaussian::sigma.
Referenced by demo(), pwiz::data::diff_string(), pwiz::identdata::DelimWriter::operator()(), pwiz::data::operator<<(), test(), test_v3(), testBinaryDataArray(), testChromatogram(), testChromatogramListWithPositions(), testIdentData(), testIdentifyFileFormat(), testMSData(), testObject(), testObject_ChromatogramList(), testObject_SpectrumList(), testObjectWithMSData(), testRun(), testSHA1(), testSpectrum(), testSpectrumListWithPositions(), testSpectrumListWriteProgress(), testTraData(), testWriteRead(), validateWriteRead(), and writeTempFile().
void test | ( | ) |
Definition at line 89 of file AMTDatabaseTest.cpp.
References pwiz::eharmony::IslandizedDatabase::Island::gaussians, pwiz::eharmony::IslandizedDatabase::Island::id, and makeAMTContainer().
int main | ( | ) |