ProteoWizard

The ProteoWizard Library and Tools are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis.

The libraries enable rapid tool creation by providing a robust, pluggable development framework that simplifies and unifies data file access, and performs standard chemistry and LCMS dataset computations.

Core code and libraries are under the Apache open source license;
the vendor libraries fall under various vendor-specific licenses.

Features

• reference implementation of the new HUPO-PSI mzML standard mass spectrometry data format
• implementation of the new HUPO-PSI mzIdentML standard mass spectrometry data format
• modern C++ techniques and design principles
• cross-platform with native compilers (MSVC on Windows, gcc on Linux, XCode on OSX)
• modular design, for testability and extensibility
• framework for rapid development of data analysis tools
• open source license suitable for both academic and commercial projects (Apache v2)
• support for reading directly from many vendor raw data formats (on Windows)